nixos/local/pkgs/vasp/intel/default.nix

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{
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buildFHSEnv, writeScript, stdenvNoCC, substituteAll, symlinkJoin, writeTextDir, src,
config, oneapiArch ? config.oneapiArch or "SSE3",
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oneapi, gcc, glibc, lmod, rsync, which, wannier90, binutils, hdf5, zlib, vtst
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}:
let
buildEnv = buildFHSEnv
{
name = "buildEnv";
# make "module load mpi" success
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targetPkgs = _: [ zlib (writeTextDir "etc/release" "") gccFull ];
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};
buildScript = writeScript "build"
''
. ${lmod}/share/lmod/lmod/init/bash
module use ${oneapi}/share/intel/modulefiles
module load tbb compiler-rt oclfpga # dependencies
module load mpi mkl compiler
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make DEPS=1 -j$NIX_BUILD_CORES
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'';
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include = substituteAll { src = ./makefile.include; inherit oneapiArch; };
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gccFull = symlinkJoin { name = "gcc"; paths = [ gcc gcc.cc gcc.cc.lib glibc.dev binutils.bintools ]; };
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vasp = stdenvNoCC.mkDerivation
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{
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name = "vasp-intel";
inherit src;
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patches = [ ../vtst.patch ];
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configurePhase =
''
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cp ${include} makefile.include
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chmod +w makefile.include
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cp ${../constr_cell_relax.F} src/constr_cell_relax.F
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cp -r ${vtst}/* src
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chmod -R +w src
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'';
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nativeBuildInputs = [ rsync which ];
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HDF5_ROOT = hdf5;
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WANNIER90_ROOT = wannier90;
buildPhase = "${buildEnv}/bin/buildEnv ${buildScript}";
installPhase =
''
mkdir -p $out/bin
for i in std gam ncl; do cp bin/vasp_$i $out/bin/vasp-$i; done
'';
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dontFixup = true;
requiredSystemFeatures = [ "gccarch-exact-${stdenvNoCC.hostPlatform.gcc.arch}" ];
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};
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startScript = variant: writeScript "vasp-intel"
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''
. ${lmod}/share/lmod/lmod/init/bash
module use ${oneapi}/share/intel/modulefiles
module load tbb compiler-rt oclfpga # dependencies
module load mpi mkl compiler
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# if OMP_NUM_THREADS is not set, set it according to SLURM_CPUS_PER_TASK or to 1
if [ -z "''${OMP_NUM_THREADS-}" ]; then
if [ -n "''${SLURM_CPUS_PER_TASK-}" ]; then
OMP_NUM_THREADS=$SLURM_CPUS_PER_TASK
else
OMP_NUM_THREADS=1
fi
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fi
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export OMP_NUM_THREADS
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# if I_MPI_PIN_PROCESSOR_LIST is not set, set it to allcores
if [ -z "''${I_MPI_PIN_PROCESSOR_LIST-}" ]; then
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I_MPI_PIN_PROCESSOR_LIST=allcores
fi
export I_MPI_PIN_PROCESSOR_LIST
# set I_MPI_PIN I_MPI_PIN_DOMAIN I_MPI_DEBUG if not set
export I_MPI_PIN=''${I_MPI_PIN-yes}
export I_MPI_PIN_DOMAIN=''${I_MPI_PIN_DOMAIN-omp}
export I_MPI_DEBUG=''${I_MPI_DEBUG-4}
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# fork to bootstrap, do not use srun, causing it could not find proper ld
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export I_MPI_HYDRA_BOOTSTRAP=''${I_MPI_HYDRA_BOOTSTRAP-fork}
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# set OMP_STACKSIZE if not set
export OMP_STACKSIZE=''${OMP_STACKSIZE-512M}
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${
if variant == "env" then ''exec "$@"''
else
''
if [ -n "''${SLURM_JOB_ID-}" ]; then
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exec mpirun -n $SLURM_NTASKS ${vasp}/bin/vasp-${variant}
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else
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exec mpirun -n 1 ${vasp}/bin/vasp-${variant}
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fi
''
}
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'';
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runEnv = variant: buildFHSEnv
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{
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name = "vasp-intel${if variant == "" then "" else "-${variant}"}";
targetPkgs = _: [ zlib vasp (writeTextDir "etc/release" "") gccFull ];
runScript = startScript (if variant == "" then "std" else variant);
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};
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in symlinkJoin
{
name = "vasp-intel";
paths = builtins.map (variant: runEnv variant) [ "" "env" "std" "gam" "ncl" ];
}