localPackages.vasp: fix

This commit is contained in:
陈浩南 2024-03-24 13:52:47 +08:00
parent 2331cdc8d3
commit 4c037193cd
3 changed files with 11 additions and 25 deletions

View File

@ -1,7 +1,7 @@
{
buildFHSEnv, writeScript, stdenvNoCC, requireFile, substituteAll, symlinkJoin, writeTextDir,
config, oneapiArch ? config.oneapiArch or "SSE3", additionalCommands ? "",
oneapi, gcc, glibc, lmod, rsync, which, wannier90, binutils, hdf5, slurm, zlib
oneapi, gcc, glibc, lmod, rsync, which, wannier90, binutils, hdf5, zlib
}:
let
sources = import ../source.nix { inherit requireFile; };
@ -71,17 +71,17 @@ let
fi
export I_MPI_PIN_PROCESSOR_LIST
# if I_MPI_PMI_LIBRARY is not set and SLURM_JOB_ID is set, set it to libpmi2.so
if [ -z "''${I_MPI_PMI_LIBRARY-}" ] && [ -n "''${SLURM_JOB_ID-}" ]; then
I_MPI_PMI_LIBRARY=${slurm}/lib/libpmi2.so
fi
export I_MPI_PMI_LIBRARY
# set I_MPI_PIN I_MPI_PIN_DOMAIN I_MPI_DEBUG if not set
export I_MPI_PIN=''${I_MPI_PIN-yes}
export I_MPI_PIN_DOMAIN=''${I_MPI_PIN_DOMAIN-omp}
export I_MPI_DEBUG=''${I_MPI_DEBUG-4}
# do not respect slurm allocation
export I_MPI_JOB_RESPECT_PROCESS_PLACEMENT=no
# fork to bootstrap, do not use srun, causing it could not find proper ld
I_MPI_HYDRA_BOOTSTRAP=fork
${additionalCommands}
${
@ -89,8 +89,7 @@ let
else
''
if [ -n "''${SLURM_JOB_ID-}" ]; then
# srun should be in PATH
exec srun --mpi=pmi2 ${vasp version}/bin/vasp-${variant}
exec mpirun -n $SLURM_NTASKS ${vasp version}/bin/vasp-${variant}
else
exec mpirun -n 1 ${vasp version}/bin/vasp-${variant}
fi

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@ -2,15 +2,8 @@ inputs:
{
config = inputs.lib.mkIf (builtins.elem "workstation" inputs.config.nixos.packages._packageSets)
{
nixos.packages._packages =
(
(builtins.map
(version: (inputs.pkgs.localPackages.vasp.intel.override
{ slurm = inputs.config.services.slurm.package; }).${version})
[ "6.3.1" "6.4.0" ])
++ (builtins.concatLists (builtins.map
(compiler: builtins.map (version: inputs.pkgs.localPackages.vasp.${compiler}.${version}) [ "6.3.1" "6.4.0" ])
[ "gnu" "gnu-mkl" "nvidia" "amd" ]))
);
nixos.packages._packages = builtins.concatLists (builtins.map
(compiler: builtins.map (version: inputs.pkgs.localPackages.vasp.${compiler}.${version}) [ "6.3.1" "6.4.0" ])
[ "amd" "gnu" "gnu-mkl" "intel" "nvidia" ]);
};
}

View File

@ -25,12 +25,6 @@ inputs:
buildInputs = prev.buildInputs ++ [ cuda_nvml_dev ];
LDFLAGS = [ "-L${cuda_nvml_dev}/lib/stubs" ];
nativeBuildInputs = prev.nativeBuildInputs ++ [ inputs.pkgs.wrapGAppsHook ];
postInstall =
''
pushd contribs/pmi2
make install
popd
'' + prev.postInstall;
});
clusterName = inputs.config.nixos.system.networking.hostname;
dbdserver =