localPackages.vasp.gnu-mkl: init

This commit is contained in:
2024-03-18 19:52:25 +08:00
parent 193aa605c6
commit 9ef099b802
5 changed files with 234 additions and 1 deletions

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@@ -52,6 +52,12 @@ inputs: rec
inherit wannier90 additionalCommands;
hdf5 = inputs.pkgs.hdf5.override { mpiSupport = true; fortranSupport = true; };
};
gnu-mkl = inputs.pkgs.callPackage ./vasp/gnu-mkl
{
inherit (inputs.pkgs.llvmPackages) openmp;
inherit wannier90 additionalCommands;
hdf5 = inputs.pkgs.hdf5.override { mpiSupport = true; fortranSupport = true; };
};
nvidia = inputs.pkgs.callPackage ./vasp/nvidia
{ inherit lmod nvhpc wannier90 additionalCommands; hdf5 = hdf5-nvhpc; };
intel = inputs.pkgs.callPackage ./vasp/intel

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@@ -0,0 +1,52 @@
{
stdenvNoCC, requireFile, writeShellApplication,
rsync, mkl, mpi, openmp, gfortran, gcc, fftwMpi, hdf5, wannier90,
additionalCommands ? ""
}:
let
sources = import ../source.nix { inherit requireFile; };
include = version: ./makefile.include-${version};
vasp = version: stdenvNoCC.mkDerivation rec
{
pname = "vasp-gnu-mkl";
inherit version;
src = sources.${version};
configurePhase =
''
cp ${include version} makefile.include
cp ${../constr_cell_relax.F} src/constr_cell_relax.F
mkdir -p bin
'';
enableParallelBuilding = true;
makeFlags = "DEPS=1";
buildInputs = [ mkl mpi openmp fftwMpi.dev fftwMpi hdf5 hdf5.dev wannier90 ];
nativeBuildInputs = [ rsync gfortran gfortran.cc gcc ];
FFTW_ROOT = fftwMpi.dev;
HDF5_ROOT = hdf5.dev;
WANNIER90_ROOT = wannier90;
MKLROOT = mkl;
installPhase =
''
mkdir -p $out/bin
for i in std gam ncl; do
cp bin/vasp_$i $out/bin/vasp-$i
done
'';
};
startScript = version: writeShellApplication
{
name = "vasp-gnu-${version}";
runtimeInputs = [ (vasp version) ];
text =
''
# if SLURM_CPUS_PER_TASK is set, use it to set OMP_NUM_THREADS
if [ -n "''${SLURM_CPUS_PER_TASK-}" ]; then
export OMP_NUM_THREADS=$SLURM_CPUS_PER_TASK
fi
${additionalCommands}
exec "$@"
'';
};
in builtins.mapAttrs (version: _: startScript version) sources

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@@ -0,0 +1,87 @@
# Default precompiler options
CPP_OPTIONS = -DHOST=\"LinuxGNU\" \
-DMPI -DMPI_BLOCK=8000 -Duse_collective \
-DscaLAPACK \
-DCACHE_SIZE=4000 \
-Davoidalloc \
-Dvasp6 \
-Duse_bse_te \
-Dtbdyn \
-Dfock_dblbuf \
-D_OPENMP -Duse_shmem -Dshmem_bcast_buffer -Dshmem_rproj
CPP = gcc -E -C -w $*$(FUFFIX) >$*$(SUFFIX) $(CPP_OPTIONS)
FC = mpif90 -fopenmp
FCL = mpif90 -fopenmp
FREE = -ffree-form -ffree-line-length-none
FFLAGS = -w -ffpe-summary=none
OFLAG = -O2
OFLAG_IN = $(OFLAG)
DEBUG = -O0
OBJECTS = fftmpiw.o fftmpi_map.o fftw3d.o fft3dlib.o
OBJECTS_O1 += fftw3d.o fftmpi.o fftmpiw.o
OBJECTS_O2 += fft3dlib.o
# For what used to be vasp.5.lib
CPP_LIB = $(CPP)
FC_LIB = $(FC)
CC_LIB = gcc
CFLAGS_LIB = -O
FFLAGS_LIB = -O1
FREE_LIB = $(FREE)
OBJECTS_LIB = linpack_double.o getshmem.o
# For the parser library
CXX_PARS = g++
LLIBS = -lstdc++
##
## Customize as of this point! Of course you may change the preceding
## part of this file as well if you like, but it should rarely be
## necessary ...
##
# When compiling on the target machine itself, change this to the
# relevant target when cross-compiling for another architecture
# VASP_TARGET_CPU ?= -march=native
# FFLAGS += $(VASP_TARGET_CPU)
# For gcc-10 and higher (comment out for older versions)
FFLAGS += -fallow-argument-mismatch
# Intel MKL for FFTW, BLAS, LAPACK, and scaLAPACK
MKLROOT ?= /path/to/your/mkl/installation
LLIBS_MKL = -L$(MKLROOT)/lib/intel64 -Wl,--no-as-needed -lmkl_gf_lp64 -lmkl_gnu_thread -lmkl_core -lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64 -lgomp -lpthread -lm -ldl
INCS = -I$(MKLROOT)/include/fftw
# Use a separate scaLAPACK installation (optional but recommended in combination with OpenMPI)
# Comment out the two lines below if you want to use scaLAPACK from MKL instead
#SCALAPACK_ROOT ?= /path/to/your/scalapack/installation
#LLIBS_MKL = -L$(SCALAPACK_ROOT)/lib -lscalapack -L$(MKLROOT)/lib/intel64 -Wl,--no-as-needed -lmkl_gf_lp64 -lmkl_gnu_thread -lmkl_core -lgomp -lpthread -lm -ldl
LLIBS += $(LLIBS_MKL)
# HDF5-support (optional but strongly recommended)
CPP_OPTIONS+= -DVASP_HDF5
HDF5_ROOT ?= /path/to/your/hdf5/installation
LLIBS += -L$(HDF5_ROOT)/lib -lhdf5_fortran
INCS += -I$(HDF5_ROOT)/include
# For the VASP-2-Wannier90 interface (optional)
CPP_OPTIONS += -DVASP2WANNIER90
WANNIER90_ROOT ?= /path/to/your/wannier90/installation
LLIBS += -L$(WANNIER90_ROOT)/lib -lwannier
# For the fftlib library (hardly any benefit in combination with MKL's FFTs)
#CPP_OPTIONS+= -Dsysv
#FCL += fftlib.o
#CXX_FFTLIB = g++ -fopenmp -std=c++11 -DFFTLIB_USE_MKL -DFFTLIB_THREADSAFE
#INCS_FFTLIB = -I./include -I$(MKLROOT)/include/fftw
#LIBS += fftlib
#LLIBS += -ldl

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@@ -0,0 +1,88 @@
# Default precompiler options
CPP_OPTIONS = -DHOST=\"LinuxGNU\" \
-DMPI -DMPI_BLOCK=8000 -Duse_collective \
-DscaLAPACK \
-DCACHE_SIZE=4000 \
-Davoidalloc \
-Dvasp6 \
-Duse_bse_te \
-Dtbdyn \
-Dfock_dblbuf \
-D_OPENMP -Duse_shmem -Dshmem_bcast_buffer -Dshmem_rproj
CPP = gcc -E -C -w $*$(FUFFIX) >$*$(SUFFIX) $(CPP_OPTIONS)
FC = mpif90 -fopenmp
FCL = mpif90 -fopenmp
FREE = -ffree-form -ffree-line-length-none
FFLAGS = -w -ffpe-summary=none
OFLAG = -O3
OFLAG_IN = $(OFLAG)
DEBUG = -O0
OBJECTS = fftmpiw.o fftmpi_map.o fftw3d.o fft3dlib.o
OBJECTS_O1 += fftw3d.o fftmpi.o fftmpiw.o
OBJECTS_O2 += fft3dlib.o
# For what used to be vasp.5.lib
CPP_LIB = $(CPP)
FC_LIB = $(FC)
CC_LIB = gcc
CFLAGS_LIB = -O
FFLAGS_LIB = -O1
FREE_LIB = $(FREE)
OBJECTS_LIB = linpack_double.o getshmem.o
# For the parser library
CXX_PARS = g++
LLIBS = -lstdc++
##
## Customize as of this point! Of course you may change the preceding
## part of this file as well if you like, but it should rarely be
## necessary ...
##
# When compiling on the target machine itself, change this to the
# relevant target when cross-compiling for another architecture
# VASP_TARGET_CPU ?= -march=native
# FFLAGS += $(VASP_TARGET_CPU)
# For gcc-10 and higher (comment out for older versions)
FFLAGS += -fallow-argument-mismatch
# Intel MKL for FFTW, BLAS, LAPACK, and scaLAPACK
MKLROOT ?= /path/to/your/mkl/installation
LLIBS_MKL = -L$(MKLROOT)/lib/intel64 -Wl,--no-as-needed -lmkl_gf_lp64 -lmkl_gnu_thread -lmkl_core -lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64 -lgomp -lpthread -lm -ldl
INCS = -I$(MKLROOT)/include/fftw
# Use a separate scaLAPACK installation (optional but recommended in combination with OpenMPI)
# Comment out the two lines below if you want to use scaLAPACK from MKL instead
#SCALAPACK_ROOT ?= /path/to/your/scalapack/installation
#LLIBS_MKL = -L$(SCALAPACK_ROOT)/lib -lscalapack -L$(MKLROOT)/lib/intel64 -Wl,--no-as-needed -lmkl_gf_lp64 -lmkl_gnu_thread -lmkl_core -lgomp -lpthread -lm -ldl
LLIBS += $(LLIBS_MKL)
# HDF5-support (optional but strongly recommended)
CPP_OPTIONS+= -DVASP_HDF5
HDF5_ROOT ?= /path/to/your/hdf5/installation
LLIBS += -L$(HDF5_ROOT)/lib -lhdf5_fortran
INCS += -I$(HDF5_ROOT)/include
# For the VASP-2-Wannier90 interface (optional)
CPP_OPTIONS += -DVASP2WANNIER90
WANNIER90_ROOT ?= /path/to/your/wannier90/installation
LLIBS += -L$(WANNIER90_ROOT)/lib -lwannier
# For the fftlib library (recommended)
CPP_OPTIONS+= -Dsysv
FCL += fftlib.o
CXX_FFTLIB = g++ -fopenmp -std=c++11 -DFFTLIB_THREADSAFE
# INCS_FFTLIB = -I./include -I$(FFTW_ROOT)/include
INCS_FFTLIB = -I./include
LIBS += fftlib
LLIBS += -ldl

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@@ -1,5 +1,5 @@
{
stdenvNoCC, requireFile, writeShellApplication, substituteAll,
stdenvNoCC, requireFile, writeShellApplication,
rsync, blas, scalapack, mpi, openmp, gfortran, gcc, fftwMpi, hdf5, wannier90,
additionalCommands ? ""
}: