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packages.biu/hpcstat: fix build
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@@ -34,9 +34,10 @@ namespace biu::process
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if constexpr (Mode.ModifyEnv)
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{
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auto current = bp::environment::current();
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std::unordered_map<bp::environment::key, bp::environment::value> env
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(current.begin(), current.end());
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std::unordered_map<bp::environment::key, bp::environment::value> env;
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for (const auto& e : current) env[e.key()] = e.value();
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for (const auto& [key, value] : input.ExtraEnv) env[key] = value;
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return env;
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}
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else return bp::environment::current();
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}();
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@@ -53,7 +53,7 @@ namespace hpcstat::disk
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{
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if
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(
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auto result = biu::exec
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auto result = biu::exec<{.Stdout = biu::IoType::String}>
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({
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// duc ls -d ./duc.db -b -D /data/gpfs01/jykang/linwei/xxx
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"{}/duc"_f(*ducbindir),
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@@ -86,7 +86,7 @@ namespace hpcstat::disk
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if
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(
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// duc info -d ./duc.db
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auto result = biu::exec
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auto result = biu::exec<{.Stdout = biu::IoType::String}>
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({"{}/duc"_f(*ducbindir), { "info", "-d", "{}/duc.db"_f(*datadir) }});
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!result
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)
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@@ -27,7 +27,8 @@ namespace hpcstat::lfs
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}
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else break;
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}
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if (auto result = biu::exec({*bsub, args}); !result) return std::nullopt;
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if (auto result = biu::exec<{.Stdout = biu::IoType::String}>({*bsub, args}); !result)
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return std::nullopt;
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else
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{
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// Job <462270> is submitted to queue <normal_1day>.
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@@ -44,7 +45,7 @@ namespace hpcstat::lfs
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{
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if
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(
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auto result = biu::exec<{.SearchPath = true, .ModifyEnv = true}>
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auto result = biu::exec<{.SearchPath = true, .ModifyEnv = true, .Stdout = biu::IoType::String}>
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({
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.Program="bjobs",
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.Args={ "-a", "-o", "jobid submit_time stat cpu_used job_name", "-json" },
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@@ -82,7 +83,8 @@ namespace hpcstat::lfs
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{
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if
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(
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auto result = biu::exec<{.SearchPath = true}>({"bjobs", { "-l", "{}"_f(jobid) }});
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auto result = biu::exec<{.SearchPath = true, .Stdout = biu::IoType::String}>
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({"bjobs", { "-l", "{}"_f(jobid) }});
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!result
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)
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return std::nullopt;
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@@ -12,7 +12,7 @@ namespace hpcstat::ssh
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return std::nullopt;
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else if
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(
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auto output = biu::exec<{.Timeout = true}>
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auto output = biu::exec<{.Timeout = true, .Stdout = biu::IoType::String}>
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({.Program=std::filesystem::path(*sshbindir) / "ssh-add", .Args{ "-l" }, .Timeout=10s});
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!output
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)
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@@ -41,7 +41,7 @@ namespace hpcstat::ssh
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return std::nullopt;
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else if
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(
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auto output = biu::exec<.Stdin = biu::IoType::String, .Timeout = true>
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auto output = biu::exec<{.Timeout = true, .Stdin = biu::IoType::String, .Stdout = biu::IoType::String}>
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({
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.Program=std::filesystem::path(*sshbindir) / "ssh-keygen",
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.Args={
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@@ -69,7 +69,7 @@ namespace hpcstat::ssh
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bf::create_directories(tempdir);
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auto signaturefile = tempdir / "signature";
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std::ofstream(signaturefile) << signature;
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auto result = biu::exec<.Stdin = biu::IoType::String, .Timeout = true>
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auto result = biu::exec<{.Timeout = true, .Stdin = biu::IoType::String}>
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({
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.Program=std::filesystem::path(*sshbindir) / "ssh-keygen",
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.Args={
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