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Author SHA1 Message Date
Rodrigo Arias Mallo
e4ab177d6c saiph: remove dangerous Intel MPI envvar 
It is no longer used, as we have moved to the release library version.
 2021-03-30 17:56:26 +02:00
Rodrigo Arias Mallo
b7dcf7bc69 rplot: add support for gziped datasets 2021-03-30 16:35:47 +02:00
Rodrigo Arias Mallo
5ac581b573 creams: remove pure mpi from granularity 2021-03-30 16:14:32 +02:00
Rodrigo Arias Mallo
b900cb95f0 creams: make configurations unique 2021-03-30 16:14:11 +02:00
Rodrigo Arias Mallo
389d3f6310 creams: simplify granularity figure 2021-03-30 16:07:14 +02:00
Rodrigo Arias Mallo
76deac0a63 creams: update figures using one single pipeline 2021-03-30 15:59:52 +02:00
Rodrigo Arias Mallo
87f751185c creams: merge similar experiments together 
Large experiments have the enableExtended parameter disabled by default,
which enables more tests.
 2021-03-30 15:55:57 +02:00
Rodrigo Arias Mallo
ec056d97e5 rplot: add total job time in the plots 2021-03-30 15:49:40 +02:00
Rodrigo Arias Mallo
872ad1a289 stdexp: allow preSrun attribute in the srun stage 
This option allows an experiment to inject commands before srun starts,
while keeping the standard srun stage options.
 2021-03-29 17:46:19 +02:00
Pedro Martinez
617ef21d38 creams: redefine granularity figures 2021-03-24 13:52:26 +01:00
Pedro Martinez
5cd9894636 creams: redefine granularity experiments 2021-03-24 13:52:26 +01:00
Pedro Martinez
bfc32ef4b7 creams: readjust granularity for strong scalability 2021-03-24 13:52:26 +01:00
Pedro Martinez
cb4d27aefb creams: bugfix in granularity values 2021-03-24 13:52:26 +01:00
Pedro Martinez
d27c696259 creams: reduce granularity combinations to 8 2021-03-24 13:52:26 +01:00
Pedro Martinez
a55019c6ef creams: add more nodes for granularity experiments 2021-03-24 13:52:26 +01:00
Rodrigo Arias Mallo
8a81c6bfba creams: add granularity figure 
Only the hybrid experiment is used by now
 2021-03-24 13:52:26 +01:00
Rodrigo Arias Mallo
c59f298ae2 creams: reduce granularity experiment units 2021-03-24 13:52:26 +01:00
Rodrigo Arias Mallo
6818b29d02 creams: fix outdated nanos6.toml 
This temporal fix allows the experiment to ignore the nanos6.toml in the
git repository, and only set version.dependencies variable.
 2021-03-24 13:52:26 +01:00
Pedro Martinez
8445fb0928 creams: run the cp command in one process only 2021-03-24 13:52:26 +01:00
Pedro Martinez
1aa0e77157 creams: avoid race condition 
Ensure only one Slurm process performs environment operations
 2021-03-24 13:52:26 +01:00
Pedro Martinez
938246322f creams: add OpenMP branches 2021-03-24 13:52:26 +01:00
Pedro Martinez
6c0f4ec1b3 creams: add granularity experiments 2021-03-24 13:52:26 +01:00
Rodrigo Arias Mallo
46f7add84c garlicd: use head instead of the read builtin 
It seems that bash is unable to propagate the SIGINT while
reading from the FIFO. This fixes the anoying ^C^C^C problems
found when running garlicd.
 2021-03-22 18:43:01 +01:00
Rodrigo Arias Mallo
87fa3bb336 sbatch: assert types to avoid silent parse errors 2021-03-19 16:37:31 +01:00
Rodrigo Arias Mallo
9c8282362a cn6: use install target from the Makefile 
The PREFIX must be set both at build and install time.
 2021-03-19 11:39:58 +01:00
Rodrigo Arias Mallo
74cd3d4fbc rplot: fix fontconfig warning 2021-03-12 19:53:24 +01:00
Rodrigo Arias Mallo
c41456412c examples: Add granularity examples 2021-03-12 19:33:40 +01:00
Rodrigo Arias Mallo
f0ae0df341 Add MIT license 2021-03-12 13:57:22 +01:00
Rodrigo Arias Mallo
9d38a37787 doc: link to the user guide in the readme 2021-03-12 13:28:05 +01:00
Rodrigo Arias Mallo
7d66b34140 nbody: fix converter rename in nanos6 CTF options 2021-03-12 12:58:41 +01:00
Rodrigo Arias Mallo
0781e8b28e nbody: remove jemalloc experiments 
Nanos6 has jemalloc enabled by default
 2021-03-12 12:58:41 +01:00
Rodrigo Arias Mallo
88087bb4b7 nbody: add time-node plot 2021-03-12 12:58:41 +01:00
Rodrigo Arias Mallo
637c57b388 nbody: improve unit name 2021-03-12 12:58:41 +01:00
Rodrigo Arias Mallo
26ab2d9bbd nbody: fix indentation in baseline R script 2021-03-12 12:58:41 +01:00
Rodrigo Arias Mallo
133ef50bb4 nbody: show time points 2021-03-12 12:58:41 +01:00
Rodrigo Arias Mallo
3a2694ad36 nbody: add mpi branch in scaling experiment 2021-03-12 12:58:37 +01:00
Rodrigo Arias Mallo
5804b167db nbody: add scaling figure 2021-03-12 12:57:01 +01:00
Rodrigo Arias Mallo
425479c9fc nbody: add scaling experiment 2021-03-12 12:57:01 +01:00
Rodrigo Arias Mallo
a286488979 rplot: add egg package for ggarange function 2021-03-12 12:56:58 +01:00
Rodrigo Arias Mallo
d70adae9ec heat: add figure for the mode experiment 2021-03-12 12:14:51 +01:00
Rodrigo Arias Mallo
854707103c heat: add ctf stage to analyze mode times 2021-03-12 12:13:10 +01:00
Rodrigo Arias Mallo
972be56eed heat: patch to print the start and end time 
It will be used to cut the CTF traces to take only the computation part
in cosideration.
 2021-03-12 12:11:24 +01:00
Rodrigo Arias Mallo
56c625bfe4 ds: add ctf mode analysis 2021-03-12 12:10:18 +01:00
Rodrigo Arias Mallo
968accd552 cn6: install dur utility for extracting statistics 2021-03-12 12:09:02 +01:00
Rodrigo Arias Mallo
3445a72686 garlic tool: copy recursively from .garlic/ 
It allows an experiment to store a CTF trace in the resultTree (which is
not recommended for large traces).
 2021-03-12 11:13:35 +01:00
Rodrigo Arias Mallo
f68564efe6 nanos6: add debug version for for libstdc++ 2021-03-11 17:57:50 +01:00
Rodrigo Arias Mallo
4780a81d70 nanos6: add patch to use CLOCK_MONOTONIC in CTF 2021-03-11 17:57:50 +01:00
Rodrigo Arias Mallo
b192fc44f5 heat: refactor cache into granul experiment 2021-03-09 18:45:33 +01:00
Rodrigo Arias Mallo
7b4da07dbf heat: add more figures from perf counters 2021-03-09 18:21:59 +01:00
Rodrigo Arias Mallo
3bcbc62a98 fig: add fig.heat.cache to fig.article 2021-03-09 18:21:22 +01:00