mirror of
https://github.com/CHN-beta/nixpkgs.git
synced 2026-01-20 06:51:04 +08:00
33afbf39f6
checkInputs used to be added to nativeBuildInputs. Now we have nativeCheckInputs to do that instead. Doing this treewide change allows to keep hashes identical to before the introduction of nativeCheckInputs.
53 lines
988 B
Nix
53 lines
988 B
Nix
{ lib
|
|
, buildPythonPackage
|
|
, fetchPypi
|
|
, nose
|
|
, numpy
|
|
, setuptools-scm
|
|
, six
|
|
, glibcLocales
|
|
, pytestCheckHook
|
|
}:
|
|
|
|
buildPythonPackage rec {
|
|
pname = "pyfaidx";
|
|
version = "0.7.1";
|
|
format = "setuptools";
|
|
|
|
src = fetchPypi {
|
|
inherit pname version;
|
|
sha256 = "sha256-OXdjK3/SkEn4sRA11+neoOLF2pwjX5grTD+uBv8foj8=";
|
|
};
|
|
|
|
nativeBuildInputs = [
|
|
setuptools-scm
|
|
];
|
|
|
|
propagatedBuildInputs = [
|
|
six
|
|
];
|
|
|
|
nativeCheckInputs = [
|
|
glibcLocales
|
|
nose
|
|
numpy
|
|
pytestCheckHook
|
|
];
|
|
|
|
disabledTestPaths = [
|
|
# FileNotFoundError: [Errno 2] No such file or directory: 'data/genes.fasta.gz'
|
|
"tests/test_Fasta_bgzip.py"
|
|
];
|
|
|
|
pythonImportsCheck = [
|
|
"pyfaidx"
|
|
];
|
|
|
|
meta = with lib; {
|
|
homepage = "https://github.com/mdshw5/pyfaidx";
|
|
description = "Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index";
|
|
license = licenses.bsd3;
|
|
maintainers = with maintainers; [ jbedo ];
|
|
};
|
|
}
|