47 lines
843 B
Nix
47 lines
843 B
Nix
{
|
|
stdenv
|
|
, rWrapper
|
|
, rPackages
|
|
, fontconfig
|
|
, jq
|
|
}:
|
|
|
|
{
|
|
# The two results to be compared
|
|
dataset
|
|
, script
|
|
, extraRPackages ? []
|
|
}:
|
|
|
|
with stdenv.lib;
|
|
|
|
let
|
|
customR = rWrapper.override {
|
|
packages = with rPackages; [ tidyverse viridis egg ] ++ extraRPackages;
|
|
};
|
|
|
|
in stdenv.mkDerivation {
|
|
name = "plot";
|
|
buildInputs = [ customR jq ];
|
|
preferLocalBuild = true;
|
|
dontPatchShebangs = true;
|
|
phases = [ "installPhase" ];
|
|
|
|
installPhase = ''
|
|
export FONTCONFIG_PATH=${fontconfig.out}/etc/fonts
|
|
mkdir -p $out
|
|
cd $out
|
|
dataset="${dataset}"
|
|
|
|
ln -s $dataset input
|
|
Rscript --vanilla ${script} ${dataset}
|
|
|
|
if [ "''${dataset##*.}" == gz ]; then
|
|
gunzip --stdout $dataset
|
|
else
|
|
cat $dataset
|
|
fi | jq -c .total_time |\
|
|
awk '{s+=$1} END {printf "%f\n", s/60}' > total_job_time_minutes
|
|
'';
|
|
}
|