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a0dac209e3
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177 Commits

Author SHA1 Message Date
David Alvarez
a0dac209e3 First test experiment 2020-11-20 13:57:12 +01:00
David Alvarez
37bd4c33f2 Add BigSort MPI+OpenMP 2020-11-20 13:57:12 +01:00
Rodrigo Arias Mallo
e8f649327a exec: Avoid variable expansion at build 
All bash variables passed in env, pre or post are now expanded at
execution time..
 2020-11-20 13:54:45 +01:00
Rodrigo Arias Mallo
d2d3ccf332 Idea for FS naming convention 2020-11-17 18:33:57 +01:00
Rodrigo Arias Mallo
e1e34ddf75 exec: add pre and post code to allow cleanup tasks 2020-11-17 16:09:38 +01:00
Rodrigo Arias Mallo
33f6ae7e55 Add bundled report example 2020-11-17 15:51:09 +01:00
Rodrigo Arias Mallo
fe0bd8b200 creams: fix pure experiment 
Use machine agnostic specification for resources
 2020-11-17 12:31:03 +01:00
Rodrigo Arias Mallo
016422cede Update nbody experiment 
Generate the input based on the target machine description.
 2020-11-17 11:26:35 +01:00
Rodrigo Arias Mallo
5e50ef19fe Update experiments with cpusPerTask 
Try to avoid manually setting the hardware specs and rather use
the hw attrset.
 2020-11-17 11:17:57 +01:00
Rodrigo Arias Mallo
641e752bd5 Add a trace message at unit evaluation 2020-11-17 11:12:12 +01:00
Rodrigo Arias Mallo
74537e682c Use divisors in the slurm cpu experiment 2020-11-17 11:01:34 +01:00
Rodrigo Arias Mallo
433c8864ea Add divisor generator 2020-11-17 11:01:34 +01:00
Rodrigo Arias Mallo
e0ca33569b garlic tools: rename divList -> halfList 2020-11-17 11:01:34 +01:00
Rodrigo Arias Mallo
dea523460a Add slurm affinity experiment 2020-11-17 11:01:34 +01:00
Rodrigo Arias Mallo
b4a3bb0ede New stdexp resource specification 
Now the options	cpusPerTask ntasksPerNode nodes and jobName are required
for the sbatch stage. Also cpuBind has been removed and is always set to
"cores,verbose" in the srun stage.
 2020-11-17 11:01:34 +01:00
Rodrigo Arias Mallo
dabc6be640 Add more helper functions 2020-11-17 11:01:34 +01:00
Rodrigo Arias Mallo
18afcb1f44 Avoid nixpkgs reevaluation 
The bsc attrset is now extensible: replacing a few bsc packages is very
fast. Also we allow the complete bscpkgs to be within other custom
overlays (not tested yet).
 2020-11-17 10:49:45 +01:00
Rodrigo Arias Mallo
288318b556 Merge branch 'saiph' into 'master' 
Saiph

See merge request rarias/bscpkgs!6
 2020-11-13 10:25:47 +01:00
Rodrigo Arias Mallo
42f2227a9f sbatch: Use experiment reservation if given 2020-11-13 10:17:54 +01:00
Sandra
4ae66adb9a Saiph: adding granularity experiment and figures 2020-11-13 09:56:40 +01:00
Sandra
86d1d426ec Saiph: Removing devMode parameter 2020-11-12 19:10:43 +01:00
Rodrigo Arias Mallo
5333058741 report: build only required figures 
Introduces a intermediate derivation that can be imported into the
report derivation, which contains a string cmd that expands the fig
variable as needed.
 2020-11-11 19:03:02 +01:00
Rodrigo Arias Mallo
0b0f6ac9f0 rplot: Add a reference to the dataset 2020-11-11 18:59:57 +01:00
Rodrigo Arias Mallo
966606b62d hpcg: precompute the input 2020-11-09 17:48:46 +01:00
Rodrigo Arias Mallo
5763b91d39 Use the trebuchet only to specify an experiment 2020-11-09 17:46:11 +01:00
Rodrigo Arias Mallo
47f67dcd85 Extend abstract 2020-11-09 12:16:56 +01:00
Rodrigo Arias Mallo
48869d6e4a Clarify some sections 2020-11-09 12:09:54 +01:00
Rodrigo Arias Mallo
92f58651b8 Increase margins and enable utf8 targets 2020-11-09 12:09:22 +01:00
Rodrigo Arias Mallo
31f7d17a41 Add manual diagram for nroff 2020-11-06 14:26:11 +01:00
Rodrigo Arias Mallo
dec183b221 Fix execution out path 2020-11-06 12:31:39 +01:00
Rodrigo Arias Mallo
92eee2ede8 Use target machine notation 2020-11-06 12:31:31 +01:00
Rodrigo Arias Mallo
a8208480c1 Add a nix shell for playing with plots 2020-11-05 20:01:26 +01:00
Rodrigo Arias Mallo
dd0823876a hpcg: add plot for oss experiment 2020-11-05 19:59:47 +01:00
Rodrigo Arias Mallo
11ac02da08 heat: Add test experiment and plot 2020-11-05 19:56:26 +01:00
Rodrigo Arias Mallo
074a75facb saiph: name the experiment and units in numcomm 2020-11-05 19:53:38 +01:00
Rodrigo Arias Mallo
7a80d1ca98 heat: Use clang by default 2020-11-05 19:52:37 +01:00
Rodrigo Arias Mallo
9e477a2313 hpcg: smaller input size 2020-11-05 19:46:34 +01:00
Rodrigo Arias Mallo
5bd042ef67 nbody: mark the points with bad std 2020-11-05 19:43:39 +01:00
Rodrigo Arias Mallo
d7be13f88d Update garlic options in store stage 2020-11-05 19:38:45 +01:00
Rodrigo Arias Mallo
476c2f20f0 Add manual and update the garlic tool 2020-11-05 19:31:21 +01:00
Rodrigo Arias Mallo
de6b4864ee Add garlic tool manual 2020-11-05 19:29:40 +01:00
Rodrigo Arias Mallo
33682ef48d Document the results and pp stages 2020-11-05 14:52:57 +01:00
Rodrigo Arias Mallo
634d2040b5 Add reference index 2020-11-04 13:00:42 +01:00
Rodrigo Arias Mallo
df4d908f1c Add more rendered files to ignore 2020-11-04 12:57:22 +01:00
Rodrigo Arias Mallo
f0122d557f WIP: postprocessing doc 2020-11-04 12:56:35 +01:00
Rodrigo Arias Mallo
0c58bb63b5 hpcg: add exp and unit name 2020-11-03 19:10:00 +01:00
Rodrigo Arias Mallo
de46366985 nbody: plot nb/cpu rather than nb 2020-11-03 19:10:00 +01:00
Rodrigo Arias Mallo
5eea48c5b0 Add exp and unit name to nbody tampi experiment 2020-11-03 19:10:00 +01:00
Rodrigo Arias Mallo
c3988dacd2 WIP: documentation for the pp pipeline 2020-11-03 19:10:00 +01:00
Rodrigo Arias Mallo
317409f6ac Move index and out inside the user directory 2020-11-03 19:10:00 +01:00