extrae: Add patch to follow upstream

bsc/extrae/default.nix

@@ -23,20 +23,16 @@ stdenv.mkDerivation rec {
   name = "extrae";
   version = "3.8.3";
 
-#  src = fetchurl {
-#    url = "https://ftp.tools.bsc.es/extrae/${name}-${version}-src.tar.bz2";
-#    sha256 = "0y036qc7y30pfj1mnb9nzv2vmxy6xxiy4pgfci6l3jc0lccdsgf8";
-#  };
-
   src = fetchFromGitHub {
-    owner = "rodarima";
-    #owner = "bsc-performance-tools";
+    owner = "bsc-performance-tools";
     repo = "extrae";
-    rev = "a8ec6882c03d130f88b09f2114887101ca9f6b09";
-    #rev = "${version}";
-    sha256 = "02gwl17r63kica6lxycyn10a0r2ciycf6g3cdq5cna5zl351qf31";
+    rev = "${version}";
+    sha256 = "08ghd14zb3bgqb1smb824d621pqqww4q01n3pyws0vp3xi0kavf4";
   };
 
+  # FIXME: Waiting for German to merge this patch
+  patches = [ ./use-command.patch ];
+
   enableParallelBuilding = true;
 
   nativeBuildInputs = [ installShellFiles ];

bsc/extrae/use-command.patch

@@ -0,0 +1,24 @@
+diff --git a/substitute b/substitute
+index d5615606..82ca91a5 100755
+--- a/substitute
++++ b/substitute
+@@ -16,7 +16,7 @@ UNAME=`uname`
+ if [ "${UNAME}" = "Darwin" -o "${UNAME}" = "AIX" ] ; then
+ 	TMPFILE=substitute-$$
+ 	${SED} "s|${KEY}|${VALUE}|g" < ${FILE} >${TMPFILE}
+-	/bin/mv -f ${TMPFILE} ${FILE}
++	command mv -f ${TMPFILE} ${FILE}
+ else
+ 	${SED} "s|${KEY}|${VALUE}|g" -i ${FILE}
+ fi
+diff --git a/substitute-all b/substitute-all
+index 48c6b76a..eda7a0f2 100755
+--- a/substitute-all
++++ b/substitute-all
+@@ -23,5 +23,5 @@ fi
+ 
+ echo "Applying modification in ${PATHTOCHANGE} - Key = ${KEY} for value = ${VALUE}"
+ 
+-/usr/bin/find ${PATHTOCHANGE} -type f -exec ${SCRIPT_LOCATION} "${SED}" "${KEY}" "${VALUE}" {} \;
++command find ${PATHTOCHANGE} -type f -exec ${SCRIPT_LOCATION} "${SED}" "${KEY}" "${VALUE}" {} \;
+